Welcome to the Microbiome
Centers Consortium (MCC)

All Microbes. All the time.

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  • News

    MCC Newsletters The Microbiome Centers Consortium (MCC) Newsletter is a comprehensive archive of community news, events, and job listings. Browse our previous editions below. June 2024 May 2024 March 2024 January 2024 October 2023 September 2023 March 2023 Subscribe Stay up-to-date with news and events by subscribing to our newsletter! Follow us on X @ALL_MICROBIOMES

  • Other Microbiome Centers and Organizations

    American Gastroenterology Association Center for Gut Microbiome Research & Education AMICI Austrian Microbiome Initative Baylor College of Medicine Alkek Center for Metagenomics and Microbiome Research Baylor College of Medicine Texas Children’s Microbiome Center Bigelow Laboratory Bigelow Laboratory Single Cell Genomics Center Bioaster Bioaster Microbiology Technology Institute Brigham and Women’s Massachusetts Host Microbiome Center Chan Zuckerberg…

  • Education Resources

    Welcome to the Education Resources page!  Here you will find searchable resources that support educators and instructors teaching microbiome sciences, and individuals new to microbiome research and analyses. Our vision for the page is to provide entry points for microbiome experiments, data, analyses, and past workshops. To navigate through the resources, filter the content using…

  • Quantitative Undergraduate Biology Education & Synthesis

    The QUBES platform hosts hundreds of teaching materials, reference materials, and cloud-based software free to use and adapts using open Creative Commons licenses.

  • Participating Centers

    University/Institution Website Arizona State University Center for Fundamental and Applied Microbiomics Arizona State University Center for Health through Microbiomes Boston University Microbiome Initiative California Institute of Technology Center for Environmental Microbial Interactions Colorado State University Microbiome (COSMic) Network Dept of Energy National Lab partnership National Microbiome Data Collaborative Dept of Veterans Affairs Military and Veterans…

  • Home

    What is the Microbiome Center Consortium (MCC)? The Microbiome Centers Consortium is a cooperative, inclusive and collaborative network of microbiome centers that aims to accelerate the understanding of all microbiomes. We share and develop intellectual, educational, and technical resources and promote common adoption of data standards and ethical guidelines as the field of microbiome science…

  • Data Science in Practice

    Data Science in Practice is an open set of materials for learning introductory data science. This website is a public version of the Data Science in Practice course, taught as COGS 108 at UC San Diego. If you are in the COGS108 class at UC San Diego, this website is not the same as the materials and coursework for…

  • The Department of Energy Systems Biology Knowledgebase

    KBase is a free and open-access large-scale data science platform that enables users to upload their own data, analyze it alongside collaborator and public data, build increasingly realistic models, and share and publish reproducible workflows and conclusions. KBase integrates data and tools in a unified graphical interface. Users no longer need to do analyses across…

  • Microbiome and COVID-19 Resources

    Read about the MCC’s commentary about coordinating microbiome research on COVID-19/SARS-CoV-2 Link: https://msystems.asm.org/content/5/6/e00999-20 Access or submit to the registry of microbiome-related COVID-19/SARS-CoV-2 projects. The clinical registry includes projects with human samples. The environmental registry includes projects that sample sewage, built environment, and other environments. Access the COVID-19 Slack channel to join the conversation, ask questions, and share…

  • Join the consortium

    Research networks have been very useful for other transdisciplinary and rapidly growing fields of research, from environmental science to human health. We invite any microbiome center, or new ones that arise, to join our efforts. Reach out to us to find out more about how you can become a part of our collaborative research network…