Welcome to the Education Resources page!
Here you will find searchable resources that support educators and instructors teaching microbiome sciences, and individuals new to microbiome research and analyses. Our vision for the page is to provide entry points for microbiome experiments, data, analyses, and past workshops.
To navigate through the resources, filter the content using Categories and Tags.
For example, you are looking for a platform with a graphical user interface. You can search the Categories of ‘Graphical User Interface’ and enter ‘Platform’ in the Search bar to filter through the list and display GUI platforms like Geneious, Nephele, KBase, and Cyverse.
IMG/M
Annotation, analysis and distribution of microbial genome and microbiome datasets sequenced at DOE’s Joint Genome Institute (JGI).
IMG/VR
Annotation, analysis, and distribution of viral fragments derived from metagenomic samples
MG-RAST
Automatic phylogenetic and functional analysis of metagenomes
ENA/EBI
Comprehensive record of the world’s nucleotide sequencing information, covering raw sequencing data, sequence assembly information and functional annotation
GTDB
Genome taxonomy
KEGG
Kyoto Encyclopedia of Genes and Genomes
Qiita
open-source microbial study management platform
DDBJ
Bioinformation and DDBJ Center provides sharing and analysis services for data from life science researches and advances science.
Silva/ARB
a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota
RDP
quality-controlled, aligned and annotated Bacterial and Archaeal 16S rRNA sequences, and Fungal 28S rRNA sequences, and a suite of analysis tools to the scientific community