Welcome to the Education Resources page!
Here you will find searchable resources that support educators and instructors teaching microbiome sciences, and individuals new to microbiome research and analyses. Our vision for the page is to provide entry points for microbiome experiments, data, analyses, and past workshops.
To navigate through the resources, filter the content using Categories and Tags.
For example, you are looking for a platform with a graphical user interface. You can search the Categories of ‘Graphical User Interface’ and enter ‘Platform’ in the Search bar to filter through the list and display GUI platforms like Geneious, Nephele, KBase, and Cyverse.
Giant Virus DB
A Phylogenomic Framework for Charting the Diversity and Evolution of Giant Viruses
VOGDB
Viral COG (VOG) – clusters of related viral proteins
Programming for Biology Course
This course will give students the bioinformatic sand scripting skills they need to derive biological insights from this abundance of data. The only prerequisite for the course is a strong commitment to learning basic UNIX and a scripting language.
Swcarpentry Tutorials
Tutorials for unix and programming.
The Ohio Super Computer – Tutorials for Unix / HPC
Tutorials on Unix and High Performance Clustering (HPC). Some are more on how to use OSC, too.
Miaverse
R/Bioc methods, benchmarking data, and educational material for microbiome research
Next-Gen sequencing workshop at UCD
Workshop based at University of California Davis that covers how to process shortgun metaG and Euk transcriptomics data
Ecological Sampling Methods Tutorials from the Offwell Woodland & Wildlife Trust
A nice website explaining sampling methods and some concepts related to ecology and diversity.
Workshop of Molecular Evolution (MOLE-WOODSHOLE)
Evolution training
Taming the BEAST 2
Evolution training